Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC6A12P48065 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SLC6A12P48065 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
SLC6A12P48065 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SLC6A12P48065 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC6A12P48065 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 KRT18P13-201ENST00000400056 1290 ntBASIC15.47■□□□□ 0.07
SLC6A12P48065 SPDYE17-201ENST00000412399 783 ntBASIC15.47■□□□□ 0.07
SLC6A12P48065 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
SLC6A12P48065 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 AL512356.2-201ENST00000546955 174 ntBASIC15.47■□□□□ 0.07
SLC6A12P48065 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC6A12P48065 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC6A12P48065 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC6A12P48065 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A12P48065 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A12P48065 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
SLC6A12P48065 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC6A12P48065 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC6A12P48065 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC6A12P48065 AC022532.1-201ENST00000624563 1728 ntBASIC15.46■□□□□ 0.07
SLC6A12P48065 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SLC6A12P48065 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC6A12P48065 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC6A12P48065 HNRNPUP1-201ENST00000554987 333 ntBASIC15.46■□□□□ 0.07
SLC6A12P48065 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 AC097359.3-201ENST00000603982 1210 ntBASIC15.46■□□□□ 0.07
SLC6A12P48065 AC003101.2-201ENST00000612557 442 ntBASIC15.46■□□□□ 0.07
SLC6A12P48065 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A12P48065 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC6A12P48065 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A12P48065 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC6A12P48065 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.46■□□□□ 0.06
SLC6A12P48065 AL139384.1-201ENST00000612143 3047 ntBASIC15.46■□□□□ 0.06
SLC6A12P48065 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SLC6A12P48065 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC6A12P48065 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC6A12P48065 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 AC105250.1-201ENST00000509378 2057 ntBASIC15.45■□□□□ 0.06
SLC6A12P48065 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms