Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.18□□□□□ -0.3
CEACAM3P40198 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.18□□□□□ -0.3
CEACAM3P40198 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 AP001160.2-201ENST00000596071 487 ntBASIC13.18□□□□□ -0.3
CEACAM3P40198 AC006538.3-201ENST00000612495 578 ntBASIC13.18□□□□□ -0.3
CEACAM3P40198 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.18□□□□□ -0.3
CEACAM3P40198 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CEACAM3P40198 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.18□□□□□ -0.3
CEACAM3P40198 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CEACAM3P40198 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CEACAM3P40198 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CEACAM3P40198 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.17□□□□□ -0.3
CEACAM3P40198 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.17□□□□□ -0.3
CEACAM3P40198 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.17□□□□□ -0.3
CEACAM3P40198 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 AP3S2-216ENST00000617003 1561 ntBASIC13.17□□□□□ -0.3
CEACAM3P40198 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.17□□□□□ -0.3
CEACAM3P40198 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CEACAM3P40198 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CEACAM3P40198 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.17□□□□□ -0.3
CEACAM3P40198 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.17□□□□□ -0.3
CEACAM3P40198 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.17□□□□□ -0.3
CEACAM3P40198 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.17□□□□□ -0.3
CEACAM3P40198 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.17□□□□□ -0.3
CEACAM3P40198 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.17□□□□□ -0.3
CEACAM3P40198 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CEACAM3P40198 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CEACAM3P40198 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.16□□□□□ -0.3
CEACAM3P40198 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CEACAM3P40198 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CEACAM3P40198 HAUS4P1-201ENST00000406739 1145 ntBASIC13.16□□□□□ -0.3
CEACAM3P40198 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.16□□□□□ -0.3
CEACAM3P40198 TSEN15P1-201ENST00000423257 515 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms