Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RPL37AP1-201ENST00000412502 279 ntBASIC15.98■□□□□ 0.15
HMGCLP35914 AL080243.2-201ENST00000418783 582 ntBASIC15.98■□□□□ 0.15
HMGCLP35914 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGCLP35914 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGCLP35914 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 SPDYE12P-201ENST00000618416 771 ntBASIC15.98■□□□□ 0.15
HMGCLP35914 AC073592.8-201ENST00000624126 511 ntBASIC15.98■□□□□ 0.15
HMGCLP35914 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGCLP35914 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGCLP35914 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGCLP35914 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
HMGCLP35914 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGCLP35914 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HMGCLP35914 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HMGCLP35914 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HMGCLP35914 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCLP35914 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HMGCLP35914 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCLP35914 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGCLP35914 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCLP35914 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 RFPL4AP1-201ENST00000530883 850 ntBASIC15.97■□□□□ 0.15
HMGCLP35914 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCLP35914 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGCLP35914 AL450472.2-201ENST00000603663 1156 ntBASIC15.97■□□□□ 0.15
HMGCLP35914 AL138828.2-201ENST00000615812 383 ntBASIC15.97■□□□□ 0.15
HMGCLP35914 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 CICP6-201ENST00000457191 2729 ntBASIC15.97■□□□□ 0.15
HMGCLP35914 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HMGCLP35914 AL596257.1-201ENST00000641463 2694 ntBASIC15.97■□□□□ 0.15
HMGCLP35914 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HMGCLP35914 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGCLP35914 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HMGCLP35914 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HMGCLP35914 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
HMGCLP35914 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.96■□□□□ 0.15
HMGCLP35914 HIST3H2BA-201ENST00000436555 524 ntBASIC15.96■□□□□ 0.15
HMGCLP35914 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 PHKG1P2-201ENST00000457537 863 ntBASIC15.96■□□□□ 0.15
HMGCLP35914 AC097493.3-201ENST00000509725 367 ntBASIC15.96■□□□□ 0.15
HMGCLP35914 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.96■□□□□ 0.15
HMGCLP35914 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HMGCLP35914 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGCLP35914 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.96■□□□□ 0.15
HMGCLP35914 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.96■□□□□ 0.15
HMGCLP35914 TEX28P1-201ENST00000613479 1221 ntBASIC15.96■□□□□ 0.15
HMGCLP35914 TEX28P2-201ENST00000617764 1221 ntBASIC15.96■□□□□ 0.15
HMGCLP35914 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGCLP35914 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 AC018892.3-201ENST00000623986 2499 ntBASIC15.96■□□□□ 0.15
HMGCLP35914 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HMGCLP35914 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HMGCLP35914 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 AC007950.2-201ENST00000615045 2347 ntBASIC15.96■□□□□ 0.15
HMGCLP35914 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCLP35914 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.96■□□□□ 0.15
HMGCLP35914 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGCLP35914 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HMGCLP35914 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
HMGCLP35914 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
HMGCLP35914 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCLP35914 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGCLP35914 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms