Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL450472.2-201ENST00000603663 1156 ntBASIC19.61■□□□□ 0.73
PDE6BP35913 AC106872.11-201ENST00000605838 421 ntBASIC19.61■□□□□ 0.73
PDE6BP35913 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
PDE6BP35913 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6BP35913 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PDE6BP35913 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
PDE6BP35913 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6BP35913 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6BP35913 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDE6BP35913 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PDE6BP35913 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6BP35913 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.6■□□□□ 0.73
PDE6BP35913 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.6■□□□□ 0.73
PDE6BP35913 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.6■□□□□ 0.73
PDE6BP35913 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.6■□□□□ 0.73
PDE6BP35913 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.6■□□□□ 0.73
PDE6BP35913 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.6■□□□□ 0.73
PDE6BP35913 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.6■□□□□ 0.73
PDE6BP35913 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.6■□□□□ 0.73
PDE6BP35913 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.6■□□□□ 0.73
PDE6BP35913 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
PDE6BP35913 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.6■□□□□ 0.73
PDE6BP35913 AL121723.1-201ENST00000445194 1519 ntBASIC19.6■□□□□ 0.73
PDE6BP35913 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 AP001282.1-201ENST00000531301 1499 ntBASIC19.6■□□□□ 0.73
PDE6BP35913 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDE6BP35913 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 PCDHB18P-201ENST00000524813 2368 ntBASIC19.59■□□□□ 0.73
PDE6BP35913 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.59■□□□□ 0.73
PDE6BP35913 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.59■□□□□ 0.73
PDE6BP35913 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.59■□□□□ 0.73
PDE6BP35913 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.59■□□□□ 0.73
PDE6BP35913 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 RNA5SP423-201ENST00000517127 109 ntBASIC19.59■□□□□ 0.73
PDE6BP35913 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.59■□□□□ 0.73
PDE6BP35913 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.59■□□□□ 0.73
PDE6BP35913 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDE6BP35913 DRD5P1-201ENST00000456605 1438 ntBASIC19.59■□□□□ 0.73
PDE6BP35913 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
PDE6BP35913 HLA-A-202ENST00000376806 1854 ntBASIC19.58■□□□□ 0.73
PDE6BP35913 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDE6BP35913 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.58■□□□□ 0.73
PDE6BP35913 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
PDE6BP35913 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.58■□□□□ 0.73
PDE6BP35913 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDE6BP35913 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDE6BP35913 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDE6BP35913 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDE6BP35913 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms