Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 PCDH8P1-201ENST00000428983 2773 ntBASIC18.31■□□□□ 0.52
COPB2P35606 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 AC078925.2-201ENST00000624013 1973 ntBASIC18.31■□□□□ 0.52
COPB2P35606 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.31■□□□□ 0.52
COPB2P35606 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COPB2P35606 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.3■□□□□ 0.52
COPB2P35606 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COPB2P35606 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.3■□□□□ 0.52
COPB2P35606 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
COPB2P35606 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COPB2P35606 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.3■□□□□ 0.52
COPB2P35606 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 AC234783.1-201ENST00000441761 496 ntBASIC18.3■□□□□ 0.52
COPB2P35606 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.3■□□□□ 0.52
COPB2P35606 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.3■□□□□ 0.52
COPB2P35606 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.3■□□□□ 0.52
COPB2P35606 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
COPB2P35606 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COPB2P35606 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.3■□□□□ 0.52
COPB2P35606 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COPB2P35606 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COPB2P35606 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
COPB2P35606 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.3■□□□□ 0.52
COPB2P35606 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
COPB2P35606 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 AP001282.1-201ENST00000531301 1499 ntBASIC18.29■□□□□ 0.52
COPB2P35606 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 AL162726.2-201ENST00000438986 1017 ntBASIC18.29■□□□□ 0.52
COPB2P35606 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.29■□□□□ 0.52
COPB2P35606 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.29■□□□□ 0.52
COPB2P35606 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.29■□□□□ 0.52
COPB2P35606 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.29■□□□□ 0.52
COPB2P35606 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COPB2P35606 LINC01115-203ENST00000606068 577 ntBASIC18.29■□□□□ 0.52
COPB2P35606 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 AL158212.4-201ENST00000624062 1286 ntBASIC18.29■□□□□ 0.52
COPB2P35606 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.29■□□□□ 0.52
COPB2P35606 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPB2P35606 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
COPB2P35606 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
COPB2P35606 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 MIR658-201ENST00000385210 100 ntBASIC18.28■□□□□ 0.52
COPB2P35606 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.28■□□□□ 0.52
COPB2P35606 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 RPS2P32-201ENST00000439199 892 ntBASIC18.28■□□□□ 0.52
COPB2P35606 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.28■□□□□ 0.52
COPB2P35606 AC022210.1-201ENST00000449856 793 ntBASIC18.28■□□□□ 0.52
COPB2P35606 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms