Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.68■□□□□ 0.74
TM4SF1P30408 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.68■□□□□ 0.74
TM4SF1P30408 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF1P30408 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
TM4SF1P30408 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TM4SF1P30408 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TM4SF1P30408 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
TM4SF1P30408 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF1P30408 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TM4SF1P30408 AC091804.1-201ENST00000486888 567 ntBASIC19.67■□□□□ 0.74
TM4SF1P30408 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TM4SF1P30408 AC105129.2-201ENST00000559536 390 ntBASIC19.67■□□□□ 0.74
TM4SF1P30408 AC104982.3-201ENST00000581995 514 ntBASIC19.67■□□□□ 0.74
TM4SF1P30408 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.67■□□□□ 0.74
TM4SF1P30408 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF1P30408 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.67■□□□□ 0.74
TM4SF1P30408 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.67■□□□□ 0.74
TM4SF1P30408 AC006453.4-201ENST00000636949 1252 ntBASIC19.67■□□□□ 0.74
TM4SF1P30408 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF1P30408 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF1P30408 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TM4SF1P30408 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 MIR1202-201ENST00000408529 83 ntBASIC19.66■□□□□ 0.74
TM4SF1P30408 CD8B2-202ENST00000417670 633 ntBASIC19.66■□□□□ 0.74
TM4SF1P30408 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.66■□□□□ 0.74
TM4SF1P30408 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.66■□□□□ 0.74
TM4SF1P30408 RNA5SP486-201ENST00000515961 83 ntBASIC19.66■□□□□ 0.74
TM4SF1P30408 SCARNA20.5-201ENST00000516991 142 ntBASIC19.66■□□□□ 0.74
TM4SF1P30408 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF1P30408 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF1P30408 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.66■□□□□ 0.74
TM4SF1P30408 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TM4SF1P30408 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.66■□□□□ 0.74
TM4SF1P30408 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TM4SF1P30408 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 AC018735.1-201ENST00000437208 1502 ntBASIC19.66■□□□□ 0.74
TM4SF1P30408 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 AC015818.8-201ENST00000587907 1519 ntBASIC19.66■□□□□ 0.74
TM4SF1P30408 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF1P30408 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF1P30408 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
TM4SF1P30408 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF1P30408 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TM4SF1P30408 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TM4SF1P30408 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TM4SF1P30408 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TM4SF1P30408 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF1P30408 HIST2H2BC-201ENST00000498492 580 ntBASIC19.65■□□□□ 0.74
TM4SF1P30408 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF1P30408 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms