Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSSP25774 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSSP25774 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSSP25774 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSSP25774 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 AC007950.2-201ENST00000615045 2347 ntBASIC14.35□□□□□ -0.11
CTSSP25774 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.35□□□□□ -0.11
CTSSP25774 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSSP25774 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 SPDYE17-201ENST00000412399 783 ntBASIC14.35□□□□□ -0.11
CTSSP25774 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 AP005018.1-201ENST00000525475 301 ntBASIC14.35□□□□□ -0.11
CTSSP25774 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSSP25774 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CTSSP25774 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.35□□□□□ -0.11
CTSSP25774 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.35□□□□□ -0.11
CTSSP25774 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.35□□□□□ -0.11
CTSSP25774 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.35□□□□□ -0.11
CTSSP25774 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 AC025048.6-201ENST00000634326 1161 ntBASIC14.35□□□□□ -0.11
CTSSP25774 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSSP25774 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 AC024909.3-201ENST00000611513 2257 ntBASIC14.35□□□□□ -0.11
CTSSP25774 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CTSSP25774 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSSP25774 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CTSSP25774 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 AC079328.2-201ENST00000561241 3354 ntBASIC14.34□□□□□ -0.11
CTSSP25774 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CTSSP25774 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSSP25774 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CTSSP25774 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSSP25774 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CTSSP25774 AL353779.1-201ENST00000434793 351 ntBASIC14.34□□□□□ -0.11
CTSSP25774 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSSP25774 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSSP25774 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSSP25774 GAPDHP21-201ENST00000450301 1010 ntBASIC14.34□□□□□ -0.11
CTSSP25774 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSSP25774 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.34□□□□□ -0.11
CTSSP25774 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.34□□□□□ -0.11
CTSSP25774 AC010336.2-201ENST00000564226 506 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms