Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.81□□□□□ -0.36
NF1P21359 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 AL133267.1-201ENST00000398220 340 ntBASIC12.81□□□□□ -0.36
NF1P21359 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 FAM86KP-201ENST00000509817 987 ntBASIC12.81□□□□□ -0.36
NF1P21359 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.81□□□□□ -0.36
NF1P21359 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.81□□□□□ -0.36
NF1P21359 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 HLA-DPA2-205ENST00000433582 733 ntBASIC12.81□□□□□ -0.36
NF1P21359 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.81□□□□□ -0.36
NF1P21359 VDAC1P7-201ENST00000462417 847 ntBASIC12.81□□□□□ -0.36
NF1P21359 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.81□□□□□ -0.36
NF1P21359 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
NF1P21359 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.81□□□□□ -0.36
NF1P21359 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
NF1P21359 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 AC092171.3-201ENST00000610122 2651 ntBASIC12.81□□□□□ -0.36
NF1P21359 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.81□□□□□ -0.36
NF1P21359 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.81□□□□□ -0.36
NF1P21359 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NF1P21359 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NF1P21359 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NF1P21359 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NF1P21359 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 AC079112.1-201ENST00000454972 939 ntBASIC12.8□□□□□ -0.36
NF1P21359 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 AC026410.1-201ENST00000507366 1101 ntBASIC12.8□□□□□ -0.36
NF1P21359 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.8□□□□□ -0.36
NF1P21359 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.8□□□□□ -0.36
NF1P21359 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.8□□□□□ -0.36
NF1P21359 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.8□□□□□ -0.36
NF1P21359 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 LINC01115-203ENST00000606068 577 ntBASIC12.8□□□□□ -0.36
NF1P21359 AC087045.2-201ENST00000606279 1003 ntBASIC12.8□□□□□ -0.36
NF1P21359 MIR6842-201ENST00000612539 65 ntBASIC12.8□□□□□ -0.36
NF1P21359 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.8□□□□□ -0.36
NF1P21359 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 LINC02199-201ENST00000506655 2702 ntBASIC12.8□□□□□ -0.36
NF1P21359 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.8□□□□□ -0.36
NF1P21359 AC078991.1-201ENST00000437297 610 ntBASIC12.8□□□□□ -0.36
NF1P21359 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 AC019193.1-201ENST00000506678 823 ntBASIC12.8□□□□□ -0.36
NF1P21359 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.8□□□□□ -0.36
NF1P21359 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.8□□□□□ -0.36
NF1P21359 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 MIR4649-201ENST00000582839 64 ntBASIC12.8□□□□□ -0.36
NF1P21359 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 AC018695.7-201ENST00000624587 2492 ntBASIC12.8□□□□□ -0.36
NF1P21359 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NF1P21359 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.8□□□□□ -0.36
NF1P21359 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NF1P21359 NOC2LP1-201ENST00000450578 752 ntBASIC12.8□□□□□ -0.36
NF1P21359 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.8□□□□□ -0.36
NF1P21359 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.8□□□□□ -0.36
NF1P21359 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC12.8□□□□□ -0.36
NF1P21359 AC092171.5-201ENST00000608012 942 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms