Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFRAP16234 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PDGFRAP16234 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.89■□□□□ 0.29
PDGFRAP16234 AC025678.2-201ENST00000562061 970 ntBASIC16.89■□□□□ 0.29
PDGFRAP16234 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PDGFRAP16234 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.89■□□□□ 0.29
PDGFRAP16234 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFRAP16234 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDGFRAP16234 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFRAP16234 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFRAP16234 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFRAP16234 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDGFRAP16234 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFRAP16234 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.88■□□□□ 0.29
PDGFRAP16234 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFRAP16234 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 RFPL4AP1-201ENST00000530883 850 ntBASIC16.88■□□□□ 0.29
PDGFRAP16234 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PDGFRAP16234 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.88■□□□□ 0.29
PDGFRAP16234 AC243562.2-201ENST00000561247 970 ntBASIC16.88■□□□□ 0.29
PDGFRAP16234 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDGFRAP16234 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFRAP16234 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFRAP16234 AP005117.1-202ENST00000581724 1908 ntBASIC16.88■□□□□ 0.29
PDGFRAP16234 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFRAP16234 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PDGFRAP16234 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.87■□□□□ 0.29
PDGFRAP16234 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.87■□□□□ 0.29
PDGFRAP16234 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PDGFRAP16234 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PDGFRAP16234 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PDGFRAP16234 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PDGFRAP16234 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFRAP16234 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.87■□□□□ 0.29
PDGFRAP16234 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.87■□□□□ 0.29
PDGFRAP16234 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDGFRAP16234 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.87■□□□□ 0.29
PDGFRAP16234 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDGFRAP16234 AC026150.2-201ENST00000564693 1156 ntBASIC16.87■□□□□ 0.29
PDGFRAP16234 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 Z92544.3-201ENST00000624747 417 ntBASIC16.87■□□□□ 0.29
PDGFRAP16234 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDGFRAP16234 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms