Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
CTSBP07858 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
CTSBP07858 HNRNPUP1-201ENST00000554987 333 ntBASIC15.16■□□□□ 0.02
CTSBP07858 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.16■□□□□ 0.02
CTSBP07858 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.16■□□□□ 0.02
CTSBP07858 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.16■□□□□ 0.02
CTSBP07858 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.16■□□□□ 0.02
CTSBP07858 AC074044.1-201ENST00000609673 707 ntBASIC15.16■□□□□ 0.02
CTSBP07858 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CTSBP07858 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CTSBP07858 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 Z97205.2-201ENST00000564697 1639 ntBASIC15.16■□□□□ 0.02
CTSBP07858 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSBP07858 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSBP07858 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.16■□□□□ 0.02
CTSBP07858 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSBP07858 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.16■□□□□ 0.02
CTSBP07858 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTSBP07858 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSBP07858 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 CDC14C-201ENST00000428251 1719 ntBASIC15.15■□□□□ 0.02
CTSBP07858 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTSBP07858 AC069224.1-201ENST00000566372 1715 ntBASIC15.15■□□□□ 0.02
CTSBP07858 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CTSBP07858 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.15■□□□□ 0.02
CTSBP07858 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.15■□□□□ 0.02
CTSBP07858 PHKG1P2-201ENST00000457537 863 ntBASIC15.15■□□□□ 0.02
CTSBP07858 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 WASH4P-201ENST00000564273 1246 ntBASIC15.15■□□□□ 0.02
CTSBP07858 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTSBP07858 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.15■□□□□ 0.02
CTSBP07858 AC025048.6-201ENST00000634326 1161 ntBASIC15.15■□□□□ 0.02
CTSBP07858 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 CYP2T1P-202ENST00000641596 2535 ntBASIC15.15■□□□□ 0.02
CTSBP07858 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSBP07858 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSBP07858 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
CTSBP07858 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSBP07858 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CTSBP07858 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
CTSBP07858 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSBP07858 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSBP07858 LINC02447-202ENST00000501888 2146 ntBASIC15.14■□□□□ 0.01
CTSBP07858 AL603832.2-201ENST00000566195 2125 ntBASIC15.14■□□□□ 0.01
CTSBP07858 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSBP07858 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSBP07858 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
CTSBP07858 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CTSBP07858 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSBP07858 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSBP07858 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSBP07858 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms