Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 PPT1-215ENST00000641471 2368 ntBASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 RPS8P6-201ENST00000426177 609 ntBASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 DNAJB3-201ENST00000446806 729 ntBASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AC112191.1-201ENST00000523689 701 ntBASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 MIR4321-201ENST00000592276 80 ntBASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AL365330.1-201ENST00000607459 531 ntBASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.24■□□□□ 0.67
UPF3BQ9BZI7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 AC011270.2-201ENST00000624293 2550 ntBASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 GPX1P2-201ENST00000429271 606 ntBASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 RARRES2P8-201ENST00000566335 367 ntBASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 MIR3197-201ENST00000582241 73 ntBASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.23■□□□□ 0.67
UPF3BQ9BZI7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 AC136621.1-201ENST00000624017 2304 ntBASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPF3BQ9BZI7 RPSAP43-201ENST00000402237 625 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms