Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 AL033527.5-202ENST00000641632 1098 ntBASIC19.41■□□□□ 0.7
SALL3Q9BXA9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 KRT18P28-201ENST00000453838 1332 ntBASIC19.41■□□□□ 0.7
SALL3Q9BXA9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL3Q9BXA9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 AC125807.1-201ENST00000483097 614 ntBASIC19.4■□□□□ 0.7
SALL3Q9BXA9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 AC025678.2-201ENST00000562061 970 ntBASIC19.4■□□□□ 0.7
SALL3Q9BXA9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL3Q9BXA9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.39■□□□□ 0.7
SALL3Q9BXA9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL3Q9BXA9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SALL3Q9BXA9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SALL3Q9BXA9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SALL3Q9BXA9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL3Q9BXA9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 AL158211.3-201ENST00000607385 239 ntBASIC19.39■□□□□ 0.69
SALL3Q9BXA9 AC073592.8-201ENST00000624126 511 ntBASIC19.39■□□□□ 0.69
SALL3Q9BXA9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.39■□□□□ 0.69
SALL3Q9BXA9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL3Q9BXA9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.38■□□□□ 0.69
SALL3Q9BXA9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL3Q9BXA9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms