Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AC068587.6-202ENST00000641839 5619 ntBASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
PCGF1Q9BSM1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 KRT8P39-201ENST00000396270 1433 ntBASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 FAM58DP-201ENST00000428076 619 ntBASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 CYMP-203ENST00000474680 1263 ntBASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PCGF1Q9BSM1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PCGF1Q9BSM1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PCGF1Q9BSM1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PCGF1Q9BSM1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PCGF1Q9BSM1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 SLC25A39P2-201ENST00000537614 270 ntBASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCGF1Q9BSM1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms