Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 AC069224.1-201ENST00000566372 1715 ntBASIC15.32■□□□□ 0.04
BBS4Q96RK4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 AL161772.1-201ENST00000610494 4412 ntBASIC15.32■□□□□ 0.04
BBS4Q96RK4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 C20orf181-201ENST00000623918 480 ntBASIC15.32■□□□□ 0.04
BBS4Q96RK4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.32■□□□□ 0.04
BBS4Q96RK4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BBS4Q96RK4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ACTG1P14-201ENST00000446382 1122 ntBASIC15.31■□□□□ 0.04
BBS4Q96RK4 AC245100.5-201ENST00000452108 331 ntBASIC15.31■□□□□ 0.04
BBS4Q96RK4 AC098859.1-201ENST00000502915 1238 ntBASIC15.31■□□□□ 0.04
BBS4Q96RK4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 MIR4321-201ENST00000592276 80 ntBASIC15.31■□□□□ 0.04
BBS4Q96RK4 AC073389.1-201ENST00000595595 795 ntBASIC15.31■□□□□ 0.04
BBS4Q96RK4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 SPTSSB-204ENST00000617024 1292 ntBASIC15.31■□□□□ 0.04
BBS4Q96RK4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 AC008267.7-201ENST00000624570 1194 ntBASIC15.31■□□□□ 0.04
BBS4Q96RK4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BBS4Q96RK4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS4Q96RK4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms