Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 CETN4P-206ENST00000642099 2168 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 AC107890.1-201ENST00000422478 521 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 EEF1DP4-201ENST00000446006 880 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 AL079307.3-201ENST00000556114 283 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 AL589739.1-201ENST00000607720 493 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 SPDYE12P-201ENST00000618416 771 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 KRT8P37-201ENST00000451609 1420 ntBASIC13.37□□□□□ -0.27
GAFA1Q96PS6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.37□□□□□ -0.27
GAFA1Q96PS6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.36□□□□□ -0.27
GAFA1Q96PS6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 SPDYE17-201ENST00000412399 783 ntBASIC13.36□□□□□ -0.27
GAFA1Q96PS6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 PMS2P2-201ENST00000425039 1128 ntBASIC13.36□□□□□ -0.27
GAFA1Q96PS6 AL645939.2-201ENST00000427340 991 ntBASIC13.36□□□□□ -0.27
GAFA1Q96PS6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 AC140878.1-201ENST00000565277 250 ntBASIC13.36□□□□□ -0.27
GAFA1Q96PS6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GAFA1Q96PS6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
GAFA1Q96PS6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms