Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AC020765.3-201ENST00000613051 740 ntBASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AC006449.5-201ENST00000610658 2098 ntBASIC13.12□□□□□ -0.31
ZNF48Q96MX3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 MTHFR-217ENST00000641820 1569 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ME2P1-201ENST00000426028 1970 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 OR8S1-201ENST00000310194 1080 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 SPDYE18-201ENST00000510091 1050 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ZNF890P-202ENST00000530367 1156 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 AC044860.1-202ENST00000559481 777 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 AC024267.1-201ENST00000582320 895 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 FLJ16779-201ENST00000612722 7638 ntBASIC13.11□□□□□ -0.31
ZNF48Q96MX3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF48Q96MX3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 GGT4P-201ENST00000623672 1708 ntBASIC13.1□□□□□ -0.31
ZNF48Q96MX3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 BTBD7P1-201ENST00000447253 1453 ntBASIC13.1□□□□□ -0.31
ZNF48Q96MX3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 PCDHA1-201ENST00000378133 2726 ntBASIC13.1□□□□□ -0.31
ZNF48Q96MX3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 AL353779.1-201ENST00000434793 351 ntBASIC13.1□□□□□ -0.31
ZNF48Q96MX3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 AC140912.1-201ENST00000577171 1054 ntBASIC13.1□□□□□ -0.31
ZNF48Q96MX3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF48Q96MX3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms