Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CFAP53Q96M91 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CFAP53Q96M91 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 AZGP1P1-201ENST00000411909 902 ntBASIC21.46■■□□□ 1.03
CFAP53Q96M91 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 AC009407.1-201ENST00000568958 598 ntBASIC21.46■■□□□ 1.03
CFAP53Q96M91 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 AC092364.2-202ENST00000597012 1073 ntBASIC21.46■■□□□ 1.03
CFAP53Q96M91 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 AC069224.1-201ENST00000566372 1715 ntBASIC21.46■■□□□ 1.03
CFAP53Q96M91 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CFAP53Q96M91 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.46■■□□□ 1.03
CFAP53Q96M91 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CFAP53Q96M91 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 AC011477.6-201ENST00000604980 1927 ntBASIC21.45■■□□□ 1.02
CFAP53Q96M91 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 REXO1L1P-202ENST00000608646 1974 ntBASIC21.45■■□□□ 1.02
CFAP53Q96M91 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 TSPY16P-201ENST00000449843 468 ntBASIC21.45■■□□□ 1.02
CFAP53Q96M91 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CFAP53Q96M91 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CFAP53Q96M91 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 SDHAP3-202ENST00000515467 728 ntBASIC21.44■■□□□ 1.02
CFAP53Q96M91 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 AC044860.1-202ENST00000559481 777 ntBASIC21.44■■□□□ 1.02
CFAP53Q96M91 MIR4745-201ENST00000577608 62 ntBASIC21.44■■□□□ 1.02
CFAP53Q96M91 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 BTBD7P1-201ENST00000447253 1453 ntBASIC21.44■■□□□ 1.02
CFAP53Q96M91 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CFAP53Q96M91 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CFAP53Q96M91 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CFAP53Q96M91 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms