Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 AC018665.1-201ENST00000622927 1362 ntBASIC16.29■□□□□ 0.2
CHFRQ96EP1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 AC084018.2-201ENST00000613093 2607 ntBASIC16.29■□□□□ 0.2
CHFRQ96EP1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 AC245100.5-201ENST00000452108 331 ntBASIC16.29■□□□□ 0.2
CHFRQ96EP1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 AC092658.1-201ENST00000505836 891 ntBASIC16.29■□□□□ 0.2
CHFRQ96EP1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 AP005482.1-201ENST00000563722 1273 ntBASIC16.29■□□□□ 0.2
CHFRQ96EP1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 BRI3BPP1-201ENST00000594224 787 ntBASIC16.29■□□□□ 0.2
CHFRQ96EP1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.29■□□□□ 0.2
CHFRQ96EP1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHFRQ96EP1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AC080080.1-201ENST00000625121 2420 ntBASIC16.28■□□□□ 0.2
CHFRQ96EP1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AL442647.2-201ENST00000429864 857 ntBASIC16.28■□□□□ 0.2
CHFRQ96EP1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AC036164.1-201ENST00000570544 333 ntBASIC16.28■□□□□ 0.2
CHFRQ96EP1 MIR5189-201ENST00000577370 114 ntBASIC16.28■□□□□ 0.2
CHFRQ96EP1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 REXO1L8P-201ENST00000604378 1897 ntBASIC16.28■□□□□ 0.2
CHFRQ96EP1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHFRQ96EP1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHFRQ96EP1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHFRQ96EP1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.27■□□□□ 0.2
CHFRQ96EP1 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms