Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 AL031731.1-201ENST00000642131 2094 ntBASIC14.35□□□□□ -0.11
RFT1Q96AA3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RFT1Q96AA3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RFT1Q96AA3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 AC007292.2-201ENST00000593524 1812 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 CICP24-201ENST00000605464 2705 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 AKR1C7P-201ENST00000305623 895 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 TSPY19P-201ENST00000418461 509 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 TSPY18P-201ENST00000441642 509 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 AC012313.10-201ENST00000623509 926 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 TMBIM7P-203ENST00000641617 1718 ntBASIC14.34□□□□□ -0.11
RFT1Q96AA3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFT1Q96AA3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.34□□□□□ -0.11
RFT1Q96AA3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.33□□□□□ -0.11
RFT1Q96AA3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
RFT1Q96AA3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RFT1Q96AA3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFT1Q96AA3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RFT1Q96AA3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 AC131009.4-201ENST00000624048 1740 ntBASIC14.33□□□□□ -0.12
RFT1Q96AA3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 SCARNA2-201ENST00000458748 420 ntBASIC14.33□□□□□ -0.12
RFT1Q96AA3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 SLC25A6P2-201ENST00000497974 877 ntBASIC14.33□□□□□ -0.12
RFT1Q96AA3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 AC021087.4-201ENST00000563761 564 ntBASIC14.33□□□□□ -0.12
RFT1Q96AA3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RFT1Q96AA3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFT1Q96AA3 AC025062.2-201ENST00000605477 670 ntBASIC14.33□□□□□ -0.12
RFT1Q96AA3 REXO1L6P-202ENST00000619970 1078 ntBASIC14.33□□□□□ -0.12
RFT1Q96AA3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms