Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AL671883.3-201ENST00000603274 991 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 AC137695.1-201ENST00000604126 489 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.87□□□□□ -0.03
HPS1Q92902 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 AL139288.1-201ENST00000623748 933 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.87□□□□□ -0.03
HPS1Q92902 FAM215A-202ENST00000632077 792 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.87□□□□□ -0.03
HPS1Q92902 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HPS1Q92902 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.87□□□□□ -0.03
HPS1Q92902 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HPS1Q92902 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.87□□□□□ -0.03
HPS1Q92902 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
HPS1Q92902 OR2I1P-209ENST00000641730 5365 ntBASIC14.86□□□□□ -0.03
HPS1Q92902 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HPS1Q92902 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.86□□□□□ -0.03
HPS1Q92902 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.86□□□□□ -0.03
HPS1Q92902 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.86□□□□□ -0.03
HPS1Q92902 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC14.86□□□□□ -0.03
HPS1Q92902 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.86□□□□□ -0.03
HPS1Q92902 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.86□□□□□ -0.03
HPS1Q92902 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.86□□□□□ -0.03
HPS1Q92902 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.86□□□□□ -0.03
HPS1Q92902 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
HPS1Q92902 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.86□□□□□ -0.03
HPS1Q92902 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HPS1Q92902 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HPS1Q92902 AC243591.1-201ENST00000452967 1364 ntBASIC14.85□□□□□ -0.03
HPS1Q92902 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.85□□□□□ -0.03
HPS1Q92902 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HPS1Q92902 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 AC005252.3-201ENST00000623855 2258 ntBASIC14.85□□□□□ -0.03
HPS1Q92902 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 ST20-AS1-201ENST00000560255 4223 ntBASIC14.85□□□□□ -0.03
HPS1Q92902 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 AC005104.2-201ENST00000427818 678 ntBASIC14.85□□□□□ -0.03
HPS1Q92902 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HPS1Q92902 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.85□□□□□ -0.03
HPS1Q92902 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.85□□□□□ -0.03
HPS1Q92902 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.85□□□□□ -0.03
HPS1Q92902 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms