Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCDC107Q8WV48 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 RPS2P1-201ENST00000434010 821 ntBASIC14.01□□□□□ -0.17
CCDC107Q8WV48 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 KRT18P56-201ENST00000507275 550 ntBASIC14.01□□□□□ -0.17
CCDC107Q8WV48 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 AC006557.2-201ENST00000592985 1240 ntBASIC14.01□□□□□ -0.17
CCDC107Q8WV48 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCDC107Q8WV48 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14□□□□□ -0.17
CCDC107Q8WV48 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCDC107Q8WV48 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14□□□□□ -0.17
CCDC107Q8WV48 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14□□□□□ -0.17
CCDC107Q8WV48 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCDC107Q8WV48 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 MPDU1-223ENST00000582151 728 ntBASIC14□□□□□ -0.17
CCDC107Q8WV48 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14□□□□□ -0.17
CCDC107Q8WV48 AF228730.7-201ENST00000641842 219 ntBASIC14□□□□□ -0.17
CCDC107Q8WV48 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCDC107Q8WV48 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 AC006486.2-201ENST00000624246 2199 ntBASIC14□□□□□ -0.17
CCDC107Q8WV48 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC107Q8WV48 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC107Q8WV48 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms