Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD5Q8TDI0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 SPDYE19P-201ENST00000338590 713 ntBASIC16.1■□□□□ 0.17
CHD5Q8TDI0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 AC055876.2-201ENST00000531834 546 ntBASIC16.1■□□□□ 0.17
CHD5Q8TDI0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 AC190387.1-201ENST00000551683 408 ntBASIC16.1■□□□□ 0.17
CHD5Q8TDI0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 AL121723.1-201ENST00000445194 1519 ntBASIC16.1■□□□□ 0.17
CHD5Q8TDI0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD5Q8TDI0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AC015922.1-201ENST00000421102 1152 ntBASIC16.09■□□□□ 0.17
CHD5Q8TDI0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.09■□□□□ 0.17
CHD5Q8TDI0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 AC105250.1-201ENST00000509378 2057 ntBASIC16.09■□□□□ 0.17
CHD5Q8TDI0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHD5Q8TDI0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
CHD5Q8TDI0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.08■□□□□ 0.17
CHD5Q8TDI0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
CHD5Q8TDI0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CHD5Q8TDI0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHD5Q8TDI0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.08■□□□□ 0.17
CHD5Q8TDI0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.08■□□□□ 0.16
CHD5Q8TDI0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms