Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 ACTBP11-201ENST00000436287 1126 ntBASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 KLF2P4-201ENST00000451959 1225 ntBASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 Z97205.2-201ENST00000564697 1639 ntBASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 AC078925.2-201ENST00000624013 1973 ntBASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 AC093525.8-201ENST00000624099 1342 ntBASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEFF1Q8IYR6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 AL162726.2-201ENST00000438986 1017 ntBASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 TDH-203ENST00000531764 1110 ntBASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 AL158212.4-201ENST00000624062 1286 ntBASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEFF1Q8IYR6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 LINC01144-201ENST00000626198 1710 ntBASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 FLJ38576-201ENST00000623820 2459 ntBASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 AL583810.1-201ENST00000553344 1045 ntBASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEFF1Q8IYR6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms