Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 MCCD1P2-201ENST00000423228 335 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 AC142381.1-201ENST00000426099 345 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SPDYE11-202ENST00000450699 704 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 KRT18P58-201ENST00000527480 1120 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 AC243562.2-201ENST00000561247 970 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SPDYE9P-201ENST00000570642 692 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SPDYE10P-202ENST00000612005 668 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SPDYE8P-202ENST00000612377 668 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 AC134407.2-201ENST00000625089 1978 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDKL3Q8IVW4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 AC067930.6-201ENST00000623257 4947 ntBASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 YBX2P1-201ENST00000394192 760 ntBASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 AC026120.1-201ENST00000611536 926 ntBASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDKL3Q8IVW4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL3Q8IVW4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms