Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTR9Q6PD62 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTR9Q6PD62 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
CTR9Q6PD62 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CTR9Q6PD62 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTR9Q6PD62 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 FO393414.2-201ENST00000405153 598 ntBASIC19.08■□□□□ 0.64
CTR9Q6PD62 EEF1DP4-201ENST00000446006 880 ntBASIC19.08■□□□□ 0.64
CTR9Q6PD62 SPTLC1P1-201ENST00000447199 261 ntBASIC19.08■□□□□ 0.64
CTR9Q6PD62 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 TERF1P3-201ENST00000505638 1227 ntBASIC19.08■□□□□ 0.64
CTR9Q6PD62 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTR9Q6PD62 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTR9Q6PD62 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTR9Q6PD62 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTR9Q6PD62 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 AC068418.2-201ENST00000577309 3703 ntBASIC19.08■□□□□ 0.64
CTR9Q6PD62 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTR9Q6PD62 AL596087.1-201ENST00000400979 1969 ntBASIC19.08■□□□□ 0.64
CTR9Q6PD62 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTR9Q6PD62 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.08■□□□□ 0.64
CTR9Q6PD62 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 AC134407.2-201ENST00000625089 1978 ntBASIC19.07■□□□□ 0.64
CTR9Q6PD62 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 HAUS4P1-201ENST00000406739 1145 ntBASIC19.07■□□□□ 0.64
CTR9Q6PD62 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 AC009118.2-201ENST00000613275 655 ntBASIC19.07■□□□□ 0.64
CTR9Q6PD62 MIR6069-201ENST00000620069 79 ntBASIC19.07■□□□□ 0.64
CTR9Q6PD62 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTR9Q6PD62 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.07■□□□□ 0.64
CTR9Q6PD62 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms