Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AC018695.7-201ENST00000624587 2492 ntBASIC19.32■□□□□ 0.68
RFX7Q2KHR2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AC136604.1-201ENST00000418535 575 ntBASIC19.32■□□□□ 0.68
RFX7Q2KHR2 U91328.1-201ENST00000437528 223 ntBASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AC093004.1-201ENST00000508850 424 ntBASIC19.32■□□□□ 0.68
RFX7Q2KHR2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.32■□□□□ 0.68
RFX7Q2KHR2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX7Q2KHR2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 AC007950.2-201ENST00000615045 2347 ntBASIC19.31■□□□□ 0.68
RFX7Q2KHR2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 AC007541.1-201ENST00000570282 1469 ntBASIC19.31■□□□□ 0.68
RFX7Q2KHR2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 AZGP1P1-201ENST00000411909 902 ntBASIC19.31■□□□□ 0.68
RFX7Q2KHR2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 AL450472.2-201ENST00000603663 1156 ntBASIC19.31■□□□□ 0.68
RFX7Q2KHR2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 IGHV3-72-202ENST00000621503 303 ntBASIC19.31■□□□□ 0.68
RFX7Q2KHR2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX7Q2KHR2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.3■□□□□ 0.68
RFX7Q2KHR2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 FO393414.2-201ENST00000405153 598 ntBASIC19.3■□□□□ 0.68
RFX7Q2KHR2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 AL353779.1-201ENST00000434793 351 ntBASIC19.3■□□□□ 0.68
RFX7Q2KHR2 AL589987.1-201ENST00000453380 819 ntBASIC19.3■□□□□ 0.68
RFX7Q2KHR2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX7Q2KHR2 SLC7A15P-201ENST00000424028 1363 ntBASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX7Q2KHR2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms