Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TIMM8BP1-201ENST00000452384 211 ntBASIC16.29■□□□□ 0.2
CDH17Q12864 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH17Q12864 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH17Q12864 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH17Q12864 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 AL671883.3-201ENST00000603274 991 ntBASIC16.29■□□□□ 0.2
CDH17Q12864 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH17Q12864 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH17Q12864 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH17Q12864 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH17Q12864 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH17Q12864 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH17Q12864 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.28■□□□□ 0.2
CDH17Q12864 ALG1L5P-201ENST00000482043 771 ntBASIC16.28■□□□□ 0.2
CDH17Q12864 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.28■□□□□ 0.2
CDH17Q12864 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.28■□□□□ 0.2
CDH17Q12864 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDH17Q12864 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH17Q12864 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.28■□□□□ 0.2
CDH17Q12864 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH17Q12864 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH17Q12864 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH17Q12864 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH17Q12864 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CDH17Q12864 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH17Q12864 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDH17Q12864 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH17Q12864 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 HLA-H-201ENST00000383620 1096 ntBASIC16.27■□□□□ 0.2
CDH17Q12864 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH17Q12864 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH17Q12864 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH17Q12864 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH17Q12864 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH17Q12864 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH17Q12864 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDH17Q12864 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH17Q12864 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CDH17Q12864 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH17Q12864 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH17Q12864 AL691432.1-201ENST00000596308 1422 ntBASIC16.27■□□□□ 0.19
CDH17Q12864 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH17Q12864 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH17Q12864 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH17Q12864 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH17Q12864 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH17Q12864 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CDH17Q12864 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH17Q12864 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms