Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 AC098850.1-201ENST00000419919 790 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 MYCLP2-201ENST00000449268 967 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 TIMM17BP1-201ENST00000545713 516 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 AC132938.2-201ENST00000579188 680 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN2P57739 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 LINC01115-203ENST00000606068 577 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN2P57739 IGHV3-72-202ENST00000621503 303 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 AL591163.1-201ENST00000641757 987 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLDN2P57739 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN2P57739 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN2P57739 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN2P57739 KRT8P37-201ENST00000451609 1420 ntBASIC15.85■□□□□ 0.13
CLDN2P57739 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLDN2P57739 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN2P57739 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN2P57739 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CLDN2P57739 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 AC123567.1-201ENST00000548294 1261 ntBASIC15.84■□□□□ 0.13
CLDN2P57739 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN2P57739 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN2P57739 AC092337.1-201ENST00000568699 1129 ntBASIC15.84■□□□□ 0.13
CLDN2P57739 CTBP2P3-201ENST00000585629 1255 ntBASIC15.84■□□□□ 0.13
CLDN2P57739 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CLDN2P57739 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CLDN2P57739 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN2P57739 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN2P57739 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN2P57739 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.83■□□□□ 0.13
CLDN2P57739 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CLDN2P57739 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN2P57739 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.83■□□□□ 0.13
CLDN2P57739 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN2P57739 PCDHA14-201ENST00000506751 2298 ntBASIC15.83■□□□□ 0.13
CLDN2P57739 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CLDN2P57739 AC124067.4-201ENST00000519691 2379 ntBASIC15.83■□□□□ 0.12
CLDN2P57739 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLDN2P57739 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 CROCCP1-201ENST00000426910 5675 ntBASIC15.83■□□□□ 0.12
CLDN2P57739 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 OR8S1-201ENST00000310194 1080 ntBASIC15.83■□□□□ 0.12
CLDN2P57739 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 MEP1AP4-201ENST00000423244 1087 ntBASIC15.83■□□□□ 0.12
CLDN2P57739 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN2P57739 AC245100.5-201ENST00000452108 331 ntBASIC15.83■□□□□ 0.12
CLDN2P57739 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN2P57739 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN2P57739 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN2P57739 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.83■□□□□ 0.12
CLDN2P57739 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN2P57739 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms