Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.7■□□□□ 0.42
CPT1AP50416 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPT1AP50416 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.7■□□□□ 0.42
CPT1AP50416 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.7■□□□□ 0.42
CPT1AP50416 AL049840.4-201ENST00000602422 811 ntBASIC17.7■□□□□ 0.42
CPT1AP50416 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.7■□□□□ 0.42
CPT1AP50416 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.7■□□□□ 0.42
CPT1AP50416 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPT1AP50416 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPT1AP50416 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CPT1AP50416 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPT1AP50416 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
CPT1AP50416 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.69■□□□□ 0.42
CPT1AP50416 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPT1AP50416 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CPT1AP50416 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.69■□□□□ 0.42
CPT1AP50416 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.69■□□□□ 0.42
CPT1AP50416 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPT1AP50416 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CPT1AP50416 C1QBPP1-201ENST00000400117 770 ntBASIC17.69■□□□□ 0.42
CPT1AP50416 BCRP2-202ENST00000447763 634 ntBASIC17.69■□□□□ 0.42
CPT1AP50416 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.69■□□□□ 0.42
CPT1AP50416 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.69■□□□□ 0.42
CPT1AP50416 BCRP6-201ENST00000510112 632 ntBASIC17.69■□□□□ 0.42
CPT1AP50416 BCRP7-201ENST00000511549 544 ntBASIC17.69■□□□□ 0.42
CPT1AP50416 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.69■□□□□ 0.42
CPT1AP50416 AC068587.3-201ENST00000526613 355 ntBASIC17.69■□□□□ 0.42
CPT1AP50416 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.69■□□□□ 0.42
CPT1AP50416 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CPT1AP50416 AC120045.2-201ENST00000567334 178 ntBASIC17.69■□□□□ 0.42
CPT1AP50416 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPT1AP50416 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.69■□□□□ 0.42
CPT1AP50416 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.69■□□□□ 0.42
CPT1AP50416 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 AC134407.2-201ENST00000625089 1978 ntBASIC17.69■□□□□ 0.42
CPT1AP50416 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
CPT1AP50416 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPT1AP50416 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
CPT1AP50416 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPT1AP50416 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.68■□□□□ 0.42
CPT1AP50416 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.68■□□□□ 0.42
CPT1AP50416 ME2P1-201ENST00000426028 1970 ntBASIC17.68■□□□□ 0.42
CPT1AP50416 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.68■□□□□ 0.42
CPT1AP50416 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPT1AP50416 FAM86MP-201ENST00000340703 885 ntBASIC17.68■□□□□ 0.42
CPT1AP50416 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.68■□□□□ 0.42
CPT1AP50416 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.68■□□□□ 0.42
CPT1AP50416 AL355864.2-201ENST00000447420 863 ntBASIC17.68■□□□□ 0.42
CPT1AP50416 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.68■□□□□ 0.42
CPT1AP50416 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.68■□□□□ 0.42
CPT1AP50416 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.68■□□□□ 0.42
CPT1AP50416 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.68■□□□□ 0.42
CPT1AP50416 AC009486.1-201ENST00000569860 813 ntBASIC17.68■□□□□ 0.42
CPT1AP50416 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.68■□□□□ 0.42
CPT1AP50416 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.68■□□□□ 0.42
CPT1AP50416 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.68■□□□□ 0.42
CPT1AP50416 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.68■□□□□ 0.42
CPT1AP50416 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPT1AP50416 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms