Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 AC026691.1-201ENST00000602502 2017 ntBASIC17.36■□□□□ 0.37
TNFSF9P41273 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TNFSF9P41273 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.36■□□□□ 0.37
TNFSF9P41273 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.36■□□□□ 0.37
TNFSF9P41273 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.36■□□□□ 0.37
TNFSF9P41273 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AC112504.1-201ENST00000623415 1841 ntBASIC17.35■□□□□ 0.37
TNFSF9P41273 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 AP003680.1-201ENST00000598970 3660 ntBASIC17.35■□□□□ 0.37
TNFSF9P41273 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TNFSF9P41273 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.35■□□□□ 0.37
TNFSF9P41273 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 SERBP1P5-201ENST00000510079 1181 ntBASIC17.35■□□□□ 0.37
TNFSF9P41273 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 ZNF890P-202ENST00000530367 1156 ntBASIC17.35■□□□□ 0.37
TNFSF9P41273 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AC025048.3-201ENST00000590609 569 ntBASIC17.35■□□□□ 0.37
TNFSF9P41273 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AC005702.4-201ENST00000618393 416 ntBASIC17.35■□□□□ 0.37
TNFSF9P41273 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF9P41273 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TNFSF9P41273 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.35■□□□□ 0.37
TNFSF9P41273 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFSF9P41273 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF9P41273 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF9P41273 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFSF9P41273 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFSF9P41273 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF9P41273 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.34■□□□□ 0.37
TNFSF9P41273 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF9P41273 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.34■□□□□ 0.37
TNFSF9P41273 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 LINC02560-201ENST00000596379 459 ntBASIC17.34■□□□□ 0.37
TNFSF9P41273 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TNFSF9P41273 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF9P41273 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF9P41273 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF9P41273 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF9P41273 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF9P41273 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF9P41273 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF9P41273 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms