Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN7P35236 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN7P35236 AL596257.1-201ENST00000641463 2694 ntBASIC16.64■□□□□ 0.26
PTPN7P35236 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN7P35236 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN7P35236 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTPN7P35236 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 AC004987.2-201ENST00000395959 1148 ntBASIC16.64■□□□□ 0.25
PTPN7P35236 EEF1DP4-201ENST00000446006 880 ntBASIC16.64■□□□□ 0.25
PTPN7P35236 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN7P35236 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN7P35236 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 AC006058.4-201ENST00000624016 1670 ntBASIC16.64■□□□□ 0.25
PTPN7P35236 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN7P35236 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN7P35236 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTPN7P35236 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPN7P35236 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN7P35236 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN7P35236 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 CICP13-201ENST00000422015 2789 ntBASIC16.63■□□□□ 0.25
PTPN7P35236 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN7P35236 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN7P35236 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN7P35236 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN7P35236 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 LINC01225-203ENST00000563550 1244 ntBASIC16.63■□□□□ 0.25
PTPN7P35236 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.63■□□□□ 0.25
PTPN7P35236 AC120114.3-201ENST00000611923 658 ntBASIC16.63■□□□□ 0.25
PTPN7P35236 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN7P35236 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN7P35236 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN7P35236 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN7P35236 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN7P35236 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN7P35236 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PTPN7P35236 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 AC090616.6-203ENST00000579186 1945 ntBASIC16.62■□□□□ 0.25
PTPN7P35236 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PTPN7P35236 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN7P35236 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
PTPN7P35236 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN7P35236 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN7P35236 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms