Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC134312.5-201ENST00000568031 1313 ntBASIC17.33■□□□□ 0.36
HOXC8P31273 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
HOXC8P31273 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HOXC8P31273 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HOXC8P31273 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
HOXC8P31273 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXC8P31273 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HOXC8P31273 FTH1P14-201ENST00000482930 551 ntBASIC17.33■□□□□ 0.36
HOXC8P31273 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXC8P31273 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXC8P31273 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXC8P31273 AC093813.1-201ENST00000605066 256 ntBASIC17.33■□□□□ 0.36
HOXC8P31273 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXC8P31273 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HOXC8P31273 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC8P31273 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HOXC8P31273 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXC8P31273 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC8P31273 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXC8P31273 FZD10-202ENST00000539839 3282 ntBASIC17.32■□□□□ 0.36
HOXC8P31273 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC8P31273 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXC8P31273 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXC8P31273 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXC8P31273 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC8P31273 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC8P31273 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC8P31273 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXC8P31273 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HOXC8P31273 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.32■□□□□ 0.36
HOXC8P31273 KRT90P-201ENST00000549264 1064 ntBASIC17.32■□□□□ 0.36
HOXC8P31273 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HOXC8P31273 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.32■□□□□ 0.36
HOXC8P31273 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.32■□□□□ 0.36
HOXC8P31273 AC107373.2-201ENST00000607735 490 ntBASIC17.32■□□□□ 0.36
HOXC8P31273 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXC8P31273 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HOXC8P31273 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXC8P31273 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXC8P31273 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HOXC8P31273 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC8P31273 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC8P31273 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC8P31273 AL355994.2-201ENST00000447882 704 ntBASIC17.31■□□□□ 0.36
HOXC8P31273 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HOXC8P31273 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC8P31273 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC8P31273 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC8P31273 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.31■□□□□ 0.36
HOXC8P31273 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC8P31273 MIR4313-201ENST00000580760 101 ntBASIC17.31■□□□□ 0.36
HOXC8P31273 MIR4538-201ENST00000581377 78 ntBASIC17.31■□□□□ 0.36
HOXC8P31273 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC8P31273 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC8P31273 MIR6869-201ENST00000619434 62 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms