Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.26■□□□□ 0.19
XPAP23025 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 AC092364.2-202ENST00000597012 1073 ntBASIC16.26■□□□□ 0.19
XPAP23025 AL390955.2-201ENST00000603032 514 ntBASIC16.26■□□□□ 0.19
XPAP23025 AL138828.2-201ENST00000615812 383 ntBASIC16.26■□□□□ 0.19
XPAP23025 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
XPAP23025 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
XPAP23025 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.26■□□□□ 0.19
XPAP23025 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.26■□□□□ 0.19
XPAP23025 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
XPAP23025 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.25■□□□□ 0.19
XPAP23025 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.25■□□□□ 0.19
XPAP23025 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
XPAP23025 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
XPAP23025 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
XPAP23025 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.25■□□□□ 0.19
XPAP23025 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
XPAP23025 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
XPAP23025 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.25■□□□□ 0.19
XPAP23025 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.25■□□□□ 0.19
XPAP23025 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
XPAP23025 SPCS2P1-201ENST00000561636 679 ntBASIC16.25■□□□□ 0.19
XPAP23025 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.25■□□□□ 0.19
XPAP23025 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.25■□□□□ 0.19
XPAP23025 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.25■□□□□ 0.19
XPAP23025 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.25■□□□□ 0.19
XPAP23025 AL096865.1-201ENST00000606796 927 ntBASIC16.25■□□□□ 0.19
XPAP23025 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.25■□□□□ 0.19
XPAP23025 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XPAP23025 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.25■□□□□ 0.19
XPAP23025 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 AC092580.3-201ENST00000430932 139 ntBASIC16.24■□□□□ 0.19
XPAP23025 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 SERBP1P3-201ENST00000459980 809 ntBASIC16.24■□□□□ 0.19
XPAP23025 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 AL079307.3-201ENST00000556114 283 ntBASIC16.24■□□□□ 0.19
XPAP23025 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.24■□□□□ 0.19
XPAP23025 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.24■□□□□ 0.19
XPAP23025 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 AC100757.3-201ENST00000622361 1406 ntBASIC16.24■□□□□ 0.19
XPAP23025 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
XPAP23025 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XPAP23025 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.24■□□□□ 0.19
XPAP23025 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
XPAP23025 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms