Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.3■□□□□ 0.68
NCLP19338 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.3■□□□□ 0.68
NCLP19338 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.3■□□□□ 0.68
NCLP19338 AL139288.1-201ENST00000623748 933 ntBASIC19.3■□□□□ 0.68
NCLP19338 AL022326.1-202ENST00000641533 845 ntBASIC19.3■□□□□ 0.68
NCLP19338 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.3■□□□□ 0.68
NCLP19338 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
NCLP19338 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
NCLP19338 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NCLP19338 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NCLP19338 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 TNRC18P2-201ENST00000417666 2714 ntBASIC19.29■□□□□ 0.68
NCLP19338 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NCLP19338 RPS2P28-201ENST00000314255 741 ntBASIC19.29■□□□□ 0.68
NCLP19338 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.29■□□□□ 0.68
NCLP19338 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 NKAPP1-205ENST00000585790 367 ntBASIC19.29■□□□□ 0.68
NCLP19338 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCLP19338 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCLP19338 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NCLP19338 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NCLP19338 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NCLP19338 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.28■□□□□ 0.68
NCLP19338 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NCLP19338 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NCLP19338 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.28■□□□□ 0.68
NCLP19338 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.28■□□□□ 0.68
NCLP19338 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.28■□□□□ 0.68
NCLP19338 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.28■□□□□ 0.68
NCLP19338 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NCLP19338 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
NCLP19338 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCLP19338 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms