Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.93■□□□□ 0.3
RARAP10276 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.93■□□□□ 0.3
RARAP10276 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARAP10276 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RARAP10276 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RARAP10276 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
RARAP10276 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.92■□□□□ 0.3
RARAP10276 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 FOXO1B-201ENST00000504678 1527 ntBASIC16.92■□□□□ 0.3
RARAP10276 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RARAP10276 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RARAP10276 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RARAP10276 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RARAP10276 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
RARAP10276 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.92■□□□□ 0.3
RARAP10276 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.92■□□□□ 0.3
RARAP10276 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.92■□□□□ 0.3
RARAP10276 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
RARAP10276 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.92■□□□□ 0.3
RARAP10276 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.92■□□□□ 0.3
RARAP10276 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RARAP10276 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARAP10276 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.91■□□□□ 0.3
RARAP10276 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RARAP10276 SSR4P1-203ENST00000599569 2260 ntBASIC16.91■□□□□ 0.3
RARAP10276 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.91■□□□□ 0.3
RARAP10276 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.91■□□□□ 0.3
RARAP10276 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RARAP10276 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 YBX2P1-201ENST00000394192 760 ntBASIC16.91■□□□□ 0.3
RARAP10276 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.91■□□□□ 0.3
RARAP10276 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.91■□□□□ 0.3
RARAP10276 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.91■□□□□ 0.3
RARAP10276 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 AC243562.1-201ENST00000560672 389 ntBASIC16.91■□□□□ 0.3
RARAP10276 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 AC027307.2-201ENST00000591252 911 ntBASIC16.91■□□□□ 0.3
RARAP10276 MIR4321-201ENST00000592276 80 ntBASIC16.91■□□□□ 0.3
RARAP10276 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.91■□□□□ 0.3
RARAP10276 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 C20orf181-201ENST00000623918 480 ntBASIC16.91■□□□□ 0.3
RARAP10276 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.91■□□□□ 0.3
RARAP10276 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms