Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.69■□□□□ 0.42
CD4P01730 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD4P01730 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CD4P01730 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.69■□□□□ 0.42
CD4P01730 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD4P01730 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.69■□□□□ 0.42
CD4P01730 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.69■□□□□ 0.42
CD4P01730 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.69■□□□□ 0.42
CD4P01730 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.69■□□□□ 0.42
CD4P01730 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CD4P01730 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.69■□□□□ 0.42
CD4P01730 AL022328.1-201ENST00000610050 478 ntBASIC17.69■□□□□ 0.42
CD4P01730 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.69■□□□□ 0.42
CD4P01730 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CD4P01730 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD4P01730 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD4P01730 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.68■□□□□ 0.42
CD4P01730 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.68■□□□□ 0.42
CD4P01730 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.68■□□□□ 0.42
CD4P01730 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
CD4P01730 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD4P01730 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD4P01730 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CD4P01730 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.68■□□□□ 0.42
CD4P01730 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.68■□□□□ 0.42
CD4P01730 BRI3BPP1-201ENST00000594224 787 ntBASIC17.68■□□□□ 0.42
CD4P01730 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.68■□□□□ 0.42
CD4P01730 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.68■□□□□ 0.42
CD4P01730 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.68■□□□□ 0.42
CD4P01730 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.68■□□□□ 0.42
CD4P01730 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CD4P01730 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD4P01730 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
CD4P01730 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 AC020907.1-201ENST00000616460 1350 ntBASIC17.67■□□□□ 0.42
CD4P01730 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 AD000864.1-201ENST00000624076 2295 ntBASIC17.67■□□□□ 0.42
CD4P01730 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 AC092933.1-201ENST00000393644 945 ntBASIC17.67■□□□□ 0.42
CD4P01730 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.67■□□□□ 0.42
CD4P01730 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.67■□□□□ 0.42
CD4P01730 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 EEF1DP4-201ENST00000446006 880 ntBASIC17.67■□□□□ 0.42
CD4P01730 FO681548.1-201ENST00000455617 1132 ntBASIC17.67■□□□□ 0.42
CD4P01730 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 TDH-203ENST00000531764 1110 ntBASIC17.67■□□□□ 0.42
CD4P01730 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.67■□□□□ 0.42
CD4P01730 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CD4P01730 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.67■□□□□ 0.42
CD4P01730 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD4P01730 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD4P01730 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CD4P01730 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms