Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL5O76039 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.73■□□□□ 0.59
CDKL5O76039 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL5O76039 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.73■□□□□ 0.59
CDKL5O76039 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL5O76039 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL5O76039 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDKL5O76039 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.73■□□□□ 0.59
CDKL5O76039 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL5O76039 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL5O76039 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDKL5O76039 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 ALG1L8P-201ENST00000533887 760 ntBASIC18.72■□□□□ 0.59
CDKL5O76039 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CDKL5O76039 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL5O76039 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.72■□□□□ 0.59
CDKL5O76039 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDKL5O76039 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.72■□□□□ 0.59
CDKL5O76039 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL5O76039 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL5O76039 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL5O76039 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDKL5O76039 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKL5O76039 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDKL5O76039 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL5O76039 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKL5O76039 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL5O76039 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKL5O76039 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL5O76039 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL5O76039 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDKL5O76039 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKL5O76039 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDKL5O76039 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
CDKL5O76039 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.7■□□□□ 0.58
CDKL5O76039 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 AC105917.1-201ENST00000506637 2539 ntBASIC18.7■□□□□ 0.58
CDKL5O76039 PAUPAR-201ENST00000630360 2965 ntBASIC18.7■□□□□ 0.58
CDKL5O76039 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDKL5O76039 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDKL5O76039 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL5O76039 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDKL5O76039 AL353705.2-201ENST00000428243 662 ntBASIC18.7■□□□□ 0.58
CDKL5O76039 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms