Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.17■□□□□ 0.02
PRAMEF2O60811 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 AL513523.2-202ENST00000427283 2040 ntBASIC15.16■□□□□ 0.02
PRAMEF2O60811 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 HLA-H-201ENST00000383620 1096 ntBASIC15.16■□□□□ 0.02
PRAMEF2O60811 MIR648-201ENST00000385046 94 ntBASIC15.16■□□□□ 0.02
PRAMEF2O60811 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 FOXO1B-201ENST00000504678 1527 ntBASIC15.16■□□□□ 0.02
PRAMEF2O60811 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PRAMEF2O60811 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF2O60811 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 FAM220BP-201ENST00000377689 816 ntBASIC15.15■□□□□ 0.02
PRAMEF2O60811 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 TSPY16P-201ENST00000449843 468 ntBASIC15.15■□□□□ 0.02
PRAMEF2O60811 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 RNA5SP410-201ENST00000516285 106 ntBASIC15.15■□□□□ 0.02
PRAMEF2O60811 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 MIR4321-201ENST00000592276 80 ntBASIC15.15■□□□□ 0.02
PRAMEF2O60811 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF2O60811 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRAMEF2O60811 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PRAMEF2O60811 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRAMEF2O60811 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRAMEF2O60811 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PRAMEF2O60811 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRAMEF2O60811 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRAMEF2O60811 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRAMEF2O60811 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms