Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC188H7C350 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 WASH6P-202ENST00000359512 1437 ntBASIC16.78■□□□□ 0.28
CCDC188H7C350 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC188H7C350 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC188H7C350 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC188H7C350 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC188H7C350 AC007292.2-201ENST00000593524 1812 ntBASIC16.77■□□□□ 0.28
CCDC188H7C350 AL009178.2-201ENST00000597278 2719 ntBASIC16.77■□□□□ 0.28
CCDC188H7C350 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC188H7C350 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC188H7C350 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC188H7C350 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC188H7C350 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC188H7C350 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.77■□□□□ 0.28
CCDC188H7C350 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC188H7C350 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC188H7C350 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC188H7C350 KRT18P34-201ENST00000488218 1270 ntBASIC16.77■□□□□ 0.28
CCDC188H7C350 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC188H7C350 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC188H7C350 AC008735.5-201ENST00000623544 497 ntBASIC16.77■□□□□ 0.28
CCDC188H7C350 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC188H7C350 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC188H7C350 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC188H7C350 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC188H7C350 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCDC188H7C350 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCDC188H7C350 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CCDC188H7C350 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC188H7C350 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC188H7C350 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC188H7C350 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC188H7C350 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC188H7C350 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC188H7C350 AC108073.2-201ENST00000464002 357 ntBASIC16.76■□□□□ 0.27
CCDC188H7C350 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC188H7C350 AF238378.1-201ENST00000526806 358 ntBASIC16.76■□□□□ 0.27
CCDC188H7C350 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 AC004790.2-201ENST00000623588 572 ntBASIC16.76■□□□□ 0.27
CCDC188H7C350 AC005593.1-201ENST00000624894 515 ntBASIC16.76■□□□□ 0.27
CCDC188H7C350 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC188H7C350 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC188H7C350 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC188H7C350 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC188H7C350 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC188H7C350 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms