Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC013268.4-201ENST00000637413 2228 ntBASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00959A0A1B0GUT2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 AC004870.1-201ENST00000315132 882 ntBASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 IGLL3P-201ENST00000412472 434 ntBASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 UNC93B6-202ENST00000528242 690 ntBASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 AC096734.2-201ENST00000562054 433 ntBASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 PPT1-215ENST00000641471 2368 ntBASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00959A0A1B0GUT2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 AC011477.6-201ENST00000604980 1927 ntBASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 OR2I1P-209ENST00000641730 5365 ntBASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00959A0A1B0GUT2 AL031284.1-201ENST00000419297 478 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms