Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC069262.1-201ENST00000539058 672 ntBASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC025678.2-201ENST00000562061 970 ntBASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC105021.1-202ENST00000570572 669 ntBASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC006538.3-201ENST00000612495 578 ntBASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 MIR6080-201ENST00000617359 66 ntBASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC196A0A1B0GTZ2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 CYP4F24P-201ENST00000586049 1580 ntBASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 AL136982.4-201ENST00000437689 1740 ntBASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC196A0A1B0GTZ2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 MIR4453-201ENST00000584019 89 ntBASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 FER1L4-210ENST00000615531 5998 ntBASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 BNIP3P1-202ENST00000550043 1585 ntBASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC196A0A1B0GTZ2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC196A0A1B0GTZ2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms