Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 AC092384.3-202ENST00000564646 2873 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 YBX2P1-201ENST00000394192 760 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 AC004832.2-201ENST00000426397 482 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SPDYE11-202ENST00000450699 704 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SPDYE9P-201ENST00000570642 692 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 AC026120.1-201ENST00000611536 926 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SPDYE10P-202ENST00000612005 668 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SPDYE8P-202ENST00000612377 668 ntBASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP46A1Q9Y6A2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 KRT8P48-201ENST00000515599 1220 ntBASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 C20orf181-201ENST00000623918 480 ntBASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.12■□□□□ 0.65
CYP46A1Q9Y6A2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms