Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 AC007967.4-201ENST00000614700 386 ntBASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 AL136317.3-201ENST00000618497 906 ntBASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 AC026691.1-201ENST00000602502 2017 ntBASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 AP005018.1-201ENST00000525475 301 ntBASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 BANF1P1-201ENST00000553684 263 ntBASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 AC105021.1-202ENST00000570572 669 ntBASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 AC026979.3-201ENST00000607315 403 ntBASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI2Q9Y5P3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 TUBB3P1-201ENST00000405796 1332 ntBASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AL139010.1-201ENST00000454878 894 ntBASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms