Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PDPK2P-202ENST00000562415 1191 ntBASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 TSPY26P-202ENST00000565928 3884 ntBASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AC087481.3-201ENST00000602886 1894 ntBASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AC007967.2-201ENST00000432613 625 ntBASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AC090616.6-203ENST00000579186 1945 ntBASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AL109954.1-202ENST00000564051 2148 ntBASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHA3Q9Y5H8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHA3Q9Y5H8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
PCDHA3Q9Y5H8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 RPL13AP23-201ENST00000480739 586 ntBASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 FOXO1B-201ENST00000504678 1527 ntBASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 AC061975.2-201ENST00000581722 295 ntBASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms