Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHA7Q9UN72 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHA7Q9UN72 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 AC090616.6-203ENST00000579186 1945 ntBASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHA7Q9UN72 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AC006486.2-201ENST00000624246 2199 ntBASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AC140113.2-201ENST00000604370 208 ntBASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AC023157.3-201ENST00000619086 2088 ntBASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 AL691432.1-201ENST00000596308 1422 ntBASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 ZNF259P1-201ENST00000407656 1365 ntBASIC18.3■□□□□ 0.52
PCDHA7Q9UN72 TNRC18P2-201ENST00000417666 2714 ntBASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 AC106730.1-201ENST00000566722 1090 ntBASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 BX640515.1-201ENST00000617215 977 ntBASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA7Q9UN72 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms