Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 ZNF444P1-201ENST00000559497 298 ntBASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 MIR3180-4-201ENST00000582223 153 ntBASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 AC087481.3-201ENST00000602886 1894 ntBASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
UBQLN2Q9UHD9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBQLN2Q9UHD9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AC069224.1-201ENST00000566372 1715 ntBASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 HBZP1-201ENST00000354915 429 ntBASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBQLN2Q9UHD9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.69□□□□□ -0.22
UBQLN2Q9UHD9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms