Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 SPDYE21P-201ENST00000413323 827 ntBASIC19.22■□□□□ 0.67
RNF216Q9NWF9 Z73361.1-201ENST00000423690 612 ntBASIC19.22■□□□□ 0.67
RNF216Q9NWF9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 AC027644.3-201ENST00000607978 557 ntBASIC19.22■□□□□ 0.67
RNF216Q9NWF9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 PSMC1P11-201ENST00000405257 1317 ntBASIC19.22■□□□□ 0.67
RNF216Q9NWF9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RNF216Q9NWF9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 Y_RNA.599-201ENST00000410489 109 ntBASIC19.21■□□□□ 0.67
RNF216Q9NWF9 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 AL020989.1-201ENST00000422979 469 ntBASIC19.21■□□□□ 0.67
RNF216Q9NWF9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 SETD6P1-201ENST00000444575 317 ntBASIC19.21■□□□□ 0.67
RNF216Q9NWF9 AC092910.2-201ENST00000491262 348 ntBASIC19.21■□□□□ 0.67
RNF216Q9NWF9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 MTCYBP37-201ENST00000510642 1133 ntBASIC19.21■□□□□ 0.67
RNF216Q9NWF9 AC136632.2-201ENST00000512891 861 ntBASIC19.21■□□□□ 0.67
RNF216Q9NWF9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF216Q9NWF9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms