Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J2Q9GZM3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AL031284.1-201ENST00000419297 478 ntBASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 RHOQP3-201ENST00000437982 621 ntBASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AL009183.1-201ENST00000603760 355 ntBASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AC148477.8-201ENST00000624298 468 ntBASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AC007064.4-201ENST00000637740 555 ntBASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AC006058.4-201ENST00000624016 1670 ntBASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.97□□□□□ -0.01
POLR2J2Q9GZM3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 AC098831.1-202ENST00000438821 336 ntBASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 AC009947.1-201ENST00000444350 727 ntBASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 HCG4B-203ENST00000450128 991 ntBASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 MIR7706-201ENST00000613747 67 ntBASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 AL691432.3-201ENST00000621860 400 ntBASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
POLR2J2Q9GZM3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
POLR2J2Q9GZM3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
POLR2J2Q9GZM3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 MIR600HG-201ENST00000449175 5984 ntBASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
POLR2J2Q9GZM3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms