Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 CNN2P11-201ENST00000429351 262 ntBASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 DNAJB3-202ENST00000449667 1266 ntBASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 AC018892.3-201ENST00000623986 2499 ntBASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCSER1Q9C0I3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 MIR4313-201ENST00000580760 101 ntBASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 AC007967.4-201ENST00000614700 386 ntBASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCSER1Q9C0I3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 SPDYE17-201ENST00000412399 783 ntBASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 PHKG1P2-201ENST00000457537 863 ntBASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 AC092183.1-201ENST00000469884 875 ntBASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 AL512356.2-201ENST00000546955 174 ntBASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 AC027612.4-201ENST00000605371 583 ntBASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 AL133215.2-201ENST00000609242 977 ntBASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCSER1Q9C0I3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.96■□□□□ 0.47
CCSER1Q9C0I3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms