Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 BTBD6P1-201ENST00000412176 1267 ntBASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 SLC25A24P2-201ENST00000415059 510 ntBASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 KRT18P25-201ENST00000508931 1278 ntBASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 AC145423.3-201ENST00000615987 467 ntBASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTNAP4Q9C0A0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 AC091804.1-201ENST00000486888 567 ntBASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 AP006547.1-201ENST00000563435 692 ntBASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 MIR4741-201ENST00000579822 90 ntBASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 AL021578.1-201ENST00000613646 709 ntBASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 AC132938.4-201ENST00000623835 848 ntBASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTNAP4Q9C0A0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 AC004898.1-201ENST00000451057 766 ntBASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTNAP4Q9C0A0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CNTNAP4Q9C0A0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms